Patrick K. Quoika
Patrick K. Quoika
Postdoctoral Researcher, Theoretical Biophysics, Technical University of Munich
Bestätigte E-Mail-Adresse bei
Zitiert von
Zitiert von
Coil–Globule Transition Thermodynamics of Poly(N-isopropylacrylamide)
M Podewitz, Y Wang, PK Quoika, JR Loeffler, M Schauperl, KR Liedl
The Journal of Physical Chemistry B 123 (41), 8838-8847, 2019
Quantifying Protein–Protein Interactions in Molecular Simulations
A Jost Lopez, PK Quoika, M Linke, G Hummer, J Köfinger
The Journal of Physical Chemistry B 124 (23), 4673-4685, 2020
Macrocycle Cell Permeability Measured by Solvation Free Energies in Polar and Apolar Environments
AS Kamenik, J Kraml, F Hofer, F Waibl, PK Quoika, U Kahler, M Schauperl, ...
Journal of chemical information and modeling 60 (7), 3508-3517, 2020
X-Entropy: A Parallelized Kernel Density Estimator with Automated Bandwidth Selection to Calculate Entropy
J Kraml, F Hofer, PK Quoika, AS Kamenik, KR Liedl
Journal of Chemical Information and Modeling 61 (4), 1533-1538, 2021
Surprisingly fast interface and elbow angle dynamics of antigen-binding fragments
ML Fernández-Quintero, KB Kröll, MC Heiss, JR Loeffler, PK Quoika, ...
Frontiers in Molecular Biosciences 7, 339, 2020
Challenges in antibody structure prediction
ML Fernández-Quintero, J Kokot, F Waibl, ALM Fischer, PK Quoika, ...
Mabs 15 (1), 2175319, 2023
Germline-Dependent Antibody Paratope States and Pairing Specific VH-VL Interface Dynamics
ML Fernández-Quintero, KB Kroell, LM Bacher, JR Loeffler, PK Quoika, ...
Frontiers in Immunology 12, 675655, 2021
Shark Antibody Variable Domains Rigidify Upon Affinity Maturation—Understanding the Potential of Shark Immunoglobulins as Therapeutics
ML Fernández-Quintero, CA Seidler, PK Quoika, KR Liedl
Frontiers in molecular biosciences 8, 639166, 2021
pyPolyBuilder: Automated Preparation of Molecular Topologies and Initial Configurations for Molecular Dynamics Simulations of Arbitrary Supramolecules
MC Ramos, PK Quoika, VAC Horta, DM Dias, EG Costa, JLM do Amaral, ...
Journal of Chemical Information and Modeling 61 (4), 1539-1544, 2021
Thermosensitive Hydration of Four Acrylamide-Based Polymers in Coil and Globule Conformations
PK Quoika, M Podewitz, Y Wang, AS Kamenik, JR Loeffler, KR Liedl
The Journal of Physical Chemistry B 124 (43), 9745-9756, 2020
Comparing antibody interfaces to inform rational design of new antibody formats
ML Fernández-Quintero, PK Quoika, FS Wedl, CA Seidler, KB Kroell, ...
Frontiers in Molecular Biosciences 9, 812750, 2022
Implementation of the Freely Jointed Chain Model to Assess Kinetics and Thermodynamics of Thermosensitive Coil–Globule Transition by Markov States
PK Quoika, ML Fernández-Quintero, M Podewitz, F Hofer, KR Liedl
The Journal of Physical Chemistry B 125 (18), 4898-4909, 2021
Structural mechanism of Fab domain dissociation as a measure of interface stability
ND Pomarici, F Waibl, PK Quoika, A Bujotzek, G Georges, ...
Journal of Computer-Aided Molecular Design 37 (4), 201-215, 2023
Water model determines thermosensitive and physicochemical properties of poly (N-isopropylacrylamide) in molecular simulations
PK Quoika, AS Kamenik, ML Fernández-Quintero, M Zacharias, KR Liedl
Frontiers in Materials 10, 1005781, 2023
Increase of Radiative Forcing through Midinfrared Absorption by Stable CO2 Dimers?
DF Dinu, P Bartl, PK Quoika, M Podewitz, KR Liedl, H Grothe, T Loerting
The Journal of Physical Chemistry A 126 (19), 2966-2975, 2022
Bispecific antibodies—effects of point mutations on CH3-CH3 interface stability
ND Pomarici, ML Fernández-Quintero, PK Quoika, F Waibl, A Bujotzek, ...
Protein Engineering, Design and Selection 35, gzac012, 2022
Conformational shifts of stacked heteroaromatics: vacuum vs. water studied by machine learning
JR Loeffler, ML Fernández-Quintero, F Waibl, PK Quoika, F Hofer, ...
Frontiers in Chemistry 9, 641610, 2021
Learning high-dimensional reaction coordinates of fast-folding proteins using State Predictive Information Bottleneck and Bias Exchange Metadynamics
N Pomarici, S Mehdi, P Quoika, S Lee, JR Loeffler, K Liedl, P Tiwary, ...
bioRxiv, 2023.07. 24.550401, 2023
Complexes++: Efficient and versatile coarse-grained simulations of protein complexes and their dense solutions
M Linke, PK Quoika, B Bramas, J Köfinger, G Hummer
The Journal of Chemical Physics 157 (20), 2022
Corrigendum: Comparing Antibody Interfaces to Inform Rational Design of New Antibody Formats
ML Fernández-Quintero, PK Quoika, FS Wedl, CA Seidler, KB Kroell, ...
Frontiers in Molecular Biosciences 9, 864654, 2022
Das System kann den Vorgang jetzt nicht ausführen. Versuchen Sie es später erneut.
Artikel 1–20