| SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups S Jammali, JD Aguilar, E Kuitche, A Ouangraoua BMC bioinformatics 20, 37-52, 2019 | 18 | 2019 |
| Reconstructing protein and gene phylogenies using reconciliation and soft-clustering E Kuitche, M Lafond, A Ouangraoua Journal of bioinformatics and computational biology 15 (06), 1740007, 2017 | 13 | 2017 |
| SimSpliceEvol: alternative splicing-aware simulation of biological sequence evolution E Kuitche, S Jammali, A Ouangraoua BMC bioinformatics 20, 1-13, 2019 | 8 | 2019 |
| Aligning coding sequences with frameshift extension penalties S Jammali, E Kuitche, A Rachati, F Bélanger, M Scott, A Ouangraoua Algorithms for Molecular Biology 12, 1-18, 2017 | 5 | 2017 |
| Reconstructing Protein and Gene Phylogenies by Extending the Framework of Reconciliation MLAO Esaie Kuitche 9th International Conference on Bioinformatics and Computational Biology …, 2017 | 4* | 2017 |
| DoubleRecViz: a web-based tool for visualizing transcript–gene–species tree reconciliation E Kuitche, Y Qi, N Tahiri, J Parmer, A Ouangraoua Bioinformatics 37 (13), 1920-1922, 2021 | 3 | 2021 |
| Improving spliced alignment for identification of ortholog groups and multiple CDS alignment JD Aguilar, S Jammali, E Kuitche, A Ouangraoua arXiv preprint arXiv:1709.06169, 2017 | | 2017 |
