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Shannon Clarke
Shannon Clarke
Senior Scientist, AgResearch
Verified email at agresearch.co.nz
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Cited by
Year
Salicylic acid dependent signaling promotes basal thermotolerance but is not essential for acquired thermotolerance in Arabidopsis thaliana
SM Clarke, LAJ Mur, JE Wood, IM Scott
The Plant Journal 38 (3), 432-447, 2004
4022004
Jasmonates act with salicylic acid to confer basal thermotolerance in Arabidopsis thaliana
SM Clarke, SM Cristescu, O Miersch, FJM Harren, C Wasternack, LAJ Mur
New Phytologist 182 (1), 175-187, 2009
3482009
Jasmonates act with salicylic acid to confer basal thermotolerance in Arabidopsis thaliana
SM Clarke, SM Cristescu, O Miersch, FJM Harren, C Wasternack, LAJ Mur
New Phytologist 182 (1), 175-187, 2009
3482009
Salicylate accumulation inhibits growth at chilling temperature in Arabidopsis
IM Scott, SM Clarke, JE Wood, LAJ Mur
Plant Physiology 135 (2), 1040-1049, 2004
3222004
Construction of relatedness matrices using genotyping-by-sequencing data
KG Dodds, JC McEwan, R Brauning, RM Anderson, TC van Stijn, ...
BMC genomics 16 (1), 1-15, 2015
1582015
SNPs for parentage testing and traceability in globally diverse breeds of sheep
MP Heaton, KA Leymaster, TS Kalbfleisch, JW Kijas, SM Clarke, ...
PloS one 9 (4), e94851, 2014
1372014
The tuatara genome reveals ancient features of amniote evolution
NJ Gemmell, K Rutherford, S Prost, M Tollis, D Winter, JR Macey, ...
Nature 584 (7821), 403-409, 2020
1342020
Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds
M Naval-Sanchez, Q Nguyen, S McWilliam, LR Porto-Neto, R Tellam, ...
Nature communications 9 (1), 859, 2018
952018
Universal DNA methylation age across mammalian tissues
AT Lu, Z Fei, A Haghani, TR Robeck, JA Zoller, CZ Li, R Lowe, Q Yan, ...
BioRxiv, 2021.01. 18.426733, 2021
922021
A high throughput single nucleotide polymorphism multiplex assay for parentage assignment in New Zealand sheep
SM Clarke, HM Henry, KG Dodds, TWD Jowett, TR Manley, RM Anderson, ...
PLoS One 9 (4), e93392, 2014
882014
Assessing accuracy of imputation using different SNP panel densities in a multi-breed sheep population
RV Ventura, SP Miller, KG Dodds, B Auvray, M Lee, M Bixley, SM Clarke, ...
Genetics Selection Evolution 48, 1-20, 2016
682016
Prediction of genomic breeding values for growth, carcass and meat quality traits in a multi-breed sheep population using a HD SNP chip
LF Brito, SM Clarke, JC McEwan, SP Miller, NK Pickering, WE Bain, ...
BMC genetics 18, 1-17, 2017
642017
Genetic parameters for various growth, carcass and meat quality traits in a New Zealand sheep population
LF Brito, JC McEwan, S Miller, W Bain, M Lee, K Dodds, SA Newman, ...
Small Ruminant Research 154, 81-91, 2017
592017
Specific requirements for cytochrome c-550 and the manganese-stabilizing protein in photoautotrophic strains of Synechocystis sp. PCC 6803 with mutations in the domain Gly-351 …
TR Morgan, JA Shand, SM Clarke, JJ Eaton-Rye
Biochemistry 37 (41), 14437-14449, 1998
501998
Universal DNA methylation age across mammalian tissues
AT Lu, Z Fei, A Haghani, TR Robeck, JA Zoller, CZ Li, R Lowe, Q Yan, ...
Nature aging 3 (9), 1144-1166, 2023
482023
Genetic diversity of a New Zealand multi-breed sheep population and composite breeds’ history revealed by a high-density SNP chip
LF Brito, JC McEwan, SP Miller, NK Pickering, WE Bain, KG Dodds, ...
BMC genetics 18, 1-11, 2017
462017
Mutation of Phe-363 in the photosystem II protein CP47 impairs photoautotrophic growth, alters the chloride requirement, and prevents photosynthesis in the absence of either …
SM Clarke, JJ Eaton-Rye
Biochemistry 38 (9), 2707-2715, 1999
441999
Applications of the soil, plant and rumen microbiomes in pastoral agriculture
GT Attwood, SA Wakelin, SC Leahy, S Rowe, S Clarke, DF Chapman, ...
Frontiers in nutrition 6, 107, 2019
432019
Estimation of linkage disequilibrium and effective population size in New Zealand sheep using three different methods to create genetic maps
V Prieur, SM Clarke, LF Brito, JC McEwan, MA Lee, R Brauning, ...
BMC genetics 18 (1), 1-19, 2017
422017
Incidence and heritability of ovine pneumonia, and the relationship with production traits in New Zealand sheep
KM McRae, HJ Baird, KG Dodds, MJ Bixley, SM Clarke
Small Ruminant Research 145, 136-141, 2016
372016
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Articles 1–20