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Jane R Allison
Jane R Allison
Associate Professor, School of Biological Sciences, University of Auckland
Verified email at auckland.ac.nz - Homepage
Title
Cited by
Cited by
Year
On developing coarse-grained models for biomolecular simulation: a review
S Riniker, JR Allison, WF van Gunsteren
Physical Chemistry Chemical Physics 14 (36), 12423-12430, 2012
2812012
Determination of the free energy landscape of α-synuclein using spin label nuclear magnetic resonance measurements
JR Allison, P Varnai, CM Dobson, M Vendruscolo
Journal of the American Chemical Society 131 (51), 18314-18326, 2009
2192009
GROMOS++ software for the analysis of biomolecular simulation trajectories
AP Eichenberger, JR Allison, J Dolenc, DP Geerke, BAC Horta, K Meier, ...
Journal of Chemical Theory and Computation 7 (10), 3379-3390, 2011
2012011
New functionalities in the GROMOS biomolecular simulation software
APE Kunz, JR Allison, DP Geerke, BAC Horta, PH Hünenberger, ...
Journal of Computational Chemistry 33 (3), 340, 2012
1182012
On the Calculation of Acyl Chain Order Parameters from Lipid Simulations
TJ Piggot, JR Allison, RB Sessions, JW Essex
Journal of chemical theory and computation 13 (11), 5683-5696, 2017
1082017
A relationship between the transient structure in the monomeric state and the aggregation propensities of α-synuclein and β-synuclein
JR Allison, RC Rivers, JC Christodoulou, M Vendruscolo, CM Dobson
Biochemistry 53 (46), 7170-7183, 2014
652014
Molecular dynamics simulation of proteins
TA Collier, TJ Piggot, JR Allison
Protein Nanotechnology: Protocols, Instrumentation, and Applications, 311-327, 2020
622020
Molecular Dynamics Simulation of β-Lactoglobulin at Different Oil/Water Interfaces
D Zare, JR Allison, KM McGrath
Biomacromolecules 17 (5), 1572-1581, 2016
542016
Computational methods for exploring protein conformations
JR Allison
Biochemical Society Transactions 48 (4), 1707-1724, 2020
522020
Biomolecular structure refinement using the GROMOS simulation software
N Schmid, JR Allison, J Dolenc, AP Eichenberger, AP Kunz, ...
Journal of Biomolecular NMR 51 (3), 265-281, 2011
432011
Peppy: A virtual reality environment for exploring the principles of polypeptide structure
DG Doak, GS Denyer, JA Gerrard, JP Mackay, JR Allison
Protein Science 29 (1), 157-168, 2020
402020
Using simulation to interpret experimental data in terms of protein conformational ensembles
JR Allison
Current Opinion in Structural Biology 43, 79-87, 2017
402017
Chromosome conformation maps in fission yeast reveal cell cycle dependent sub nuclear structure
RS Grand, T Pichugina, LR Gehlen, MB Jones, P Tsai, JR Allison, ...
Nucleic Acids Research 42 (20), 12585-12599, 2014
352014
Directed evolution of a model primordial enzyme provides insights into the development of the genetic code
MM Müller, JR Allison, N Hongdilokkul, L Gaillon, P Kast, ...
PLoS genetics 9 (1), e1003187, 2013
352013
Current computer modeling cannot explain why two highly similar sequences fold into different structures
JR Allison, M Bergeler, N Hansen, WF van Gunsteren
Biochemistry 50 (50), 10965-10973, 2011
342011
A method to explore protein side chain conformational variability using experimental data
JR Allison, WF van Gunsteren
ChemPhysChem 10 (18), 3213-3228, 2009
302009
Deciphering β-Lactoglobulin Interactions at an Oil–Water Interface: A Molecular Dynamics Study
D Zare, KM McGrath, JR Allison
Biomacromolecules 16 (6), 1855-1861, 2015
272015
On the calculation of 3 J αβ-coupling constants for side chains in proteins
D Steiner, JR Allison, AP Eichenberger, WF van Gunsteren
Journal of biomolecular NMR 53 (3), 223-246, 2012
272012
Selective nutrient transport in bacteria: multicomponent transporter systems reign supreme
JS Davies, MJ Currie, J Wright, MC Newton-Vesty, RA North, PD Mace, ...
Frontiers in Molecular Biosciences 8, 578, 2021
262021
The sodium sialic acid symporter from Staphylococcus aureus has altered substrate specificity.
R North, W Wahlgren, D Remus, M Scalise, S Kessans, E Dunevall, ...
Frontiers in Chemistry 6, 233, 2018
262018
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