|Analyses of pig genomes provide insight into porcine demography and evolution|
MAM Groenen, AL Archibald, H Uenishi, CK Tuggle, Y Takeuchi, ...
Nature 491 (7424), 393-398, 2012
|Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology|
AM Ramos, RPMA Crooijmans, NA Affara, AJ Amaral, AL Archibald, ...
PloS one 4 (8), e6524, 2009
|Strong signatures of selection in the domestic pig genome|
CJ Rubin, HJ Megens, AM Barrio, K Maqbool, S Sayyab, D Schwochow, ...
Proceedings of the National Academy of Sciences 109 (48), 19529-19536, 2012
|Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis|
RA Dalloul, JA Long, AV Zimin, L Aslam, K Beal, LA Blomberg, P Bouffard, ...
PLoS Biol 8 (9), e1000475, 2010
|A high-density SNP-based linkage map of the chicken genome reveals sequence features correlated with recombination rate|
MAM Groenen, P Wahlberg, M Foglio, HH Cheng, HJ Megens, ...
Genome research 19 (3), 510-519, 2009
|Genome-wide assessment of worldwide chicken SNP genetic diversity indicates significant absence of rare alleles in commercial breeds|
WM Muir, GKS Wong, Y Zhang, J Wang, MAM Groenen, ...
Proceedings of the National Academy of Sciences 105 (45), 17312-17317, 2008
|The development and characterization of a 60K SNP chip for chicken|
MAM Groenen, HJ Megens, Y Zare, WC Warren, LDW Hillier, ...
BMC genomics 12 (1), 274, 2011
|Regions of homozygosity in the porcine genome: consequence of demography and the recombination landscape|
M Bosse, HJ Megens, O Madsen, Y Paudel, LAF Frantz, LB Schook, ...
PLoS Genet 8 (11), e1003100, 2012
|Pig domestication and human-mediated dispersal in western Eurasia revealed through ancient DNA and geometric morphometrics|
C Ottoni, LG Flink, A Evin, C Geörg, B De Cupere, W Van Neer, ...
Molecular biology and evolution 30 (4), 824-832, 2013
|Evidence of long-term gene flow and selection during domestication from analyses of Eurasian wild and domestic pig genomes|
LAF Frantz, JG Schraiber, O Madsen, HJ Megens, A Cagan, M Bosse, ...
Nature genetics 47 (10), 1141-1148, 2015
|Linkage disequilibrium decay and haplotype block structure in the pig|
AJ Amaral, HJ Megens, RPMA Crooijmans, HCM Heuven, MAM Groenen
Genetics 179 (1), 569-579, 2008
|Signatures of diversifying selection in European pig breeds|
S Wilkinson, ZH Lu, HJ Megens, AL Archibald, C Haley, IJ Jackson, ...
PLoS Genet 9 (4), e1003453, 2013
|Biodiversity of pig breeds from China and Europe estimated from pooled DNA samples: differences in microsatellite variation between two areas of domestication|
HJ Megens, RPMA Crooijmans, M San Cristobal, X Hui, N Li, ...
Genetics Selection Evolution 40 (1), 1-26, 2008
|A high density recombination map of the pig reveals a correlation between sex-specific recombination and GC content|
F Tortereau, B Servin, L Frantz, HJ Megens, D Milan, G Rohrer, ...
BMC genomics 13 (1), 586, 2012
|Genome-wide footprints of pig domestication and selection revealed through massive parallel sequencing of pooled DNA|
AJ Amaral, L Ferretti, HJ Megens, RPMA Crooijmans, H Nie, ...
PloS one 6 (4), e14782, 2011
|Evolutionary signals of selection on cognition from the great tit genome and methylome|
VN Laine, TI Gossmann, KM Schachtschneider, CJ Garroway, O Madsen, ...
Nature Communications 7 (1), 1-9, 2016
|Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus|
LAF Frantz, JG Schraiber, O Madsen, HJ Megens, M Bosse, Y Paudel, ...
Genome biology 14 (9), 1-12, 2013
|Evolutionary dynamics of copy number variation in pig genomes in the context of adaptation and domestication|
Y Paudel, O Madsen, HJ Megens, LAF Frantz, M Bosse, ...
BMC genomics 14 (1), 1-13, 2013
|Genomic analysis reveals selection for Asian genes in European pigs following human-mediated introgression|
M Bosse, HJ Megens, LAF Frantz, O Madsen, G Larson, Y Paudel, ...
Nature communications 5 (1), 1-8, 2014
|Genome‐wide single nucleotide polymorphism analysis reveals recent genetic introgression from domestic pigs into Northwest European wild boar populations|
DJ Goedbloed, HJ Megens, P Van Hooft, JM Herrero‐Medrano, W Lutz, ...
Molecular ecology 22 (3), 856-866, 2013