| The PROSITE database, its status in 2002 L Falquet, M Pagni, P Bucher, N Hulo, CJA Sigrist, K Hofmann, A Bairoch Nucleic acids research 30 (1), 235-238, 2002 | 1253 | 2002 |
| The InterPro database, an integrated documentation resource for protein families, domains and functional sites R Apweiler, TK Attwood, A Bairoch, E Birney, M Biswas, P Bucher, ... Nucleic acids research 29 (1), 37-40, 2001 | 1141 | 2001 |
| PROSITE: a documented database using patterns and profiles as motif descriptors CJA Sigrist, L Cerutti, N Hulo, A Gattiker, L Falquet, M Pagni, A Bairoch, ... Briefings in bioinformatics 3 (3), 265-274, 2002 | 962 | 2002 |
| The PROSITE database N Hulo, A Bairoch, V Bulliard, L Cerutti, E De Castro, ... Nucleic acids research 34 (suppl_1), D227-D230, 2006 | 954 | 2006 |
| The InterPro Database, 2003 brings increased coverage and new features NJ Mulder, R Apweiler, TK Attwood, A Bairoch, D Barrell, A Bateman, ... Nucleic acids research 31 (1), 315-318, 2003 | 844 | 2003 |
| InterPro, progress and status in 2005 NJ Mulder, R Apweiler, TK Attwood, A Bairoch, A Bateman, D Binns, ... Nucleic acids research 33 (suppl_1), D201-D205, 2005 | 712 | 2005 |
| A downstream mediator in the growth repression limb of the jasmonate pathway Y Yan, S Stolz, A Chételat, P Reymond, M Pagni, L Dubugnon, EE Farmer Science Signaling 19 (8), 2470, 2007 | 617 | 2007 |
| Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis E Tisserant, M Malbreil, A Kuo, A Kohler, A Symeonidi, R Balestrini, ... Proceedings of the National Academy of Sciences 110 (50), 20117-20122, 2013 | 514 | 2013 |
| InterPro—an integrated documentation resource for protein families, domains and functional sites R Apweiler, TK Attwood, A Bairoch, E Birney, M Biswas, P Bucher, ... Bioinformatics 16 (12), 1145-1150, 2000 | 329 | 2000 |
| Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources S Vuilleumier, L Chistoserdova, MC Lee, F Bringel, A Lajus, Y Zhou, ... PLoS One 4 (5), e5584, 2009 | 223 | 2009 |
| MyHits: improvements to an interactive resource for analyzing protein sequences M Pagni, V Ioannidis, L Cerutti, M Zahn-Zabal, CV Jongeneel, J Hau, ... Nucleic acids research 35 (suppl_2), W433-W437, 2007 | 191 | 2007 |
| InterPro: an integrated documentation resource for protein families, domains and functional sites InterPro Consortium, NJ Mulder, R Apweiler, TK Attwood, A Bairoch, ... Briefings in bioinformatics 3 (3), 225-235, 2002 | 184 | 2002 |
| PDB_REDO: automated re-refinement of X-ray structure models in the PDB RP Joosten, J Salzemann, V Bloch, H Stockinger, AC Berglund, ... Journal of applied crystallography 42 (3), 376-384, 2009 | 178 | 2009 |
| Automated annotation of microbial proteomes in SWISS-PROT A Gattiker, K Michoud, C Rivoire, AH Auchincloss, E Coudert, T Lima, ... Computational biology and chemistry 27 (1), 49-58, 2003 | 172 | 2003 |
| The elusive roles of bacterial glutathione S-transferases: new lessons from genomes S Vuilleumier, M Pagni Applied microbiology and biotechnology 58 (2), 138-146, 2002 | 147 | 2002 |
| Bacillus subtilis 168 gene lytF encodes a γ-D-glutamate-meso-diaminopimelate muropeptidase expressed by the alternative vegetative sigma factor, σD P Margot, M Pagni, D Karamata Microbiology 145 (1), 57-65, 1999 | 123 | 1999 |
| MyHits: a new interactive resource for protein annotation and domain identification M Pagni, V Ioannidis, L Cerutti, M Zahn-Zabal, CV Jongeneel, L Falquet Nucleic acids research 32 (suppl_2), W332-W335, 2004 | 122 | 2004 |
| MetaNetX/MNXref–reconciliation of metabolites and biochemical reactions to bring together genome-scale metabolic networks S Moretti, O Martin, T Van Du Tran, A Bridge, A Morgat, M Pagni Nucleic acids research 44 (D1), D523-D526, 2016 | 116 | 2016 |
| Dotlet: diagonal plots in a web browser T Junier, M Pagni Bioinformatics 16 (2), 178-179, 2000 | 106 | 2000 |
| MetaNetX. org: a website and repository for accessing, analysing and manipulating metabolic networks M Ganter, T Bernard, S Moretti, J Stelling, M Pagni Bioinformatics 29 (6), 815-816, 2013 | 92 | 2013 |
