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Gregory Kucherov
Gregory Kucherov
Directeur de recherche CNRS, LIGM, Univ Gaspard Monge, France
Bestätigte E-Mail-Adresse bei univ-mlv.fr - Startseite
Titel
Zitiert von
Zitiert von
Jahr
mreps: efficient and flexible detection of tandem repeats in DNA
R Kolpakov, G Bana, G Kucherov
Nucleic acids research 31 (13), 3672-3678, 2003
4572003
Finding maximal repetitions in a word in linear time
R Kolpakov, G Kucherov
40th Annual Symposium on Foundations of Computer Science (Cat. No. 99CB37039 …, 1999
3841999
YASS: enhancing the sensitivity of DNA similarity search
L Noé, G Kucherov
Nucleic acids research 33 (suppl_2), W540-W543, 2005
3522005
NORINE: a database of nonribosomal peptides
S Caboche, M Pupin, V Leclere, A Fontaine, P Jacques, G Kucherov
Nucleic acids research 36 (suppl_1), D326-D331, 2007
3432007
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics): Preface
M Abe, K Aoki, G Ateniese, R Avanzi, Z Beerliová, O Billet, A Biryukov, ...
Lecture Notes in Computer Science (including subseries Lecture Notes in …, 2006
198*2006
Diversity of monomers in nonribosomal peptides: towards the prediction of origin and biological activity
S Caboche, V Leclère, M Pupin, G Kucherov, P Jacques
Journal of bacteriology 192 (19), 5143-5150, 2010
1412010
A unifying framework for seed sensitivity and its application to subset seeds
G Kucherov, L Noé, M Roytberg
Journal of bioinformatics and computational biology 4 (02), 553-569, 2006
1132006
On maximal repetitions in words
R Kolpakov, G Kucherov
Journal of Discrete Algorithms 1 (1), 159-186, 2000
1072000
Improved hit criteria for DNA local alignment
L Noé, G Kucherov
BMC bioinformatics 5 (1), 1-9, 2004
962004
Reconstructing a Hamiltonian cycle by querying the graph: Application to DNA physical mapping
V Grebinski, G Kucherov
Discrete Applied Mathematics 88 (1-3), 147-165, 1998
891998
Optimal reconstruction of graphs under the additive model
V Grebinski, G Kucherov
Algorithmica 28 (1), 104-124, 2000
862000
Spaced seeds improve k-mer-based metagenomic classification
K Břinda, M Sykulski, G Kucherov
Bioinformatics 31 (22), 3584-3592, 2015
822015
Multiseed lossless filtration
G Kucherov, L Noé, M Roytberg
IEEE/ACM Transactions on Computational Biology and Bioinformatics 2 (1), 51-61, 2005
812005
Using cascading Bloom filters to improve the memory usage for de Brujin graphs
K Salikhov, G Sacomoto, G Kucherov
Algorithms for Molecular Biology 9 (1), 1-10, 2014
772014
Combinatorial search on graphs motivated by bioinformatics applications: A brief survey
M Bouvel, V Grebinski, G Kucherov
International Workshop on Graph-Theoretic Concepts in Computer Science, 16-27, 2005
732005
Finding approximate repetitions under Hamming distance
R Kolpakov, G Kucherov
Theoretical Computer Science 303 (1), 135-156, 2003
672003
Searching for gapped palindromes
R Kolpakov, G Kucherov
Theoretical Computer Science 410 (51), 5365-5373, 2009
632009
Matching a set of strings with variable length don't cares
G Kucherov, M Rusinowitch
Theoretical Computer Science 178 (1-2), 129-154, 1997
621997
Using cascading Bloom filters to improve the memory usage for de Brujin graphs
K Salikhov, G Sacomoto, G Kucherov
International Workshop on Algorithms in Bioinformatics, 364-376, 2013
572013
Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing
K Břinda, A Callendrello, KC Ma, DR MacFadden, T Charalampous, ...
Nature microbiology 5 (3), 455-464, 2020
522020
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