| Pooled CRISPR screening with single-cell transcriptome read-out Paul Datlinger, André F Rendeiro, Christian Schmidl, Thomas Krausgruber ... Nature Methods 14 (3), 297-301, 2017 | 981 | 2017 |
| A molecular single-cell lung atlas of lethal COVID-19 JC Melms, J Biermann, H Huang, Y Wang, A Nair, S Tagore, I Katsyv, ... Nature 595 (7865), 114-119, 2021 | 564 | 2021 |
| ChIPmentation: fast, robust, low-input ChIP-seq for histones and transcription factors C Schmidl, AF Rendeiro, NC Sheffield, C Bock Nature methods 12 (10), 963-965, 2015 | 511 | 2015 |
| Molecular interrogation of hypothalamic organization reveals distinct dopamine neuronal subtypes RA Romanov, A Zeisel, J Bakker, F Girach, A Hellysaz, R Tomer, A Alpar, ... Nature neuroscience 20 (2), 176-188, 2017 | 450 | 2017 |
| Microbiota-derived metabolites suppress arthritis by amplifying aryl-hydrocarbon receptor activation in regulatory B cells EC Rosser, CJM Piper, DE Matei, PA Blair, AF Rendeiro, M Orford, ... Cell metabolism 31 (4), 837-851. e10, 2020 | 425 | 2020 |
| Structural cells are key regulators of organ-specific immune responses T Krausgruber, N Fortelny, V Fife-Gernedl, M Senekowitsch, LC Schuster, ... Nature 583 (7815), 296-302, 2020 | 365 | 2020 |
| The spatial landscape of lung pathology during COVID-19 progression AF Rendeiro, H Ravichandran, Y Bram, V Chandar, J Kim, C Meydan, ... Nature 593 (7860), 564-569, 2021 | 335 | 2021 |
| Mitochondria are a subset of extracellular vesicles released by activated monocytes and induce type I IFN and TNF responses in endothelial cells F Puhm, T Afonyushkin, U Resch, G Obermayer, M Rohde, T Penz, ... Circulation research 125 (1), 43-52, 2019 | 238 | 2019 |
| Ultra-high-throughput single-cell RNA sequencing and perturbation screening with combinatorial fluidic indexing P Datlinger, AF Rendeiro, T Boenke, M Senekowitsch, T Krausgruber, ... Nature methods 18 (6), 635-642, 2021 | 212* | 2021 |
| Functional dissection of the enhancer repertoire in human embryonic stem cells TS Barakat, F Halbritter, M Zhang, AF Rendeiro, E Perenthaler, C Bock, ... Cell stem cell 23 (2), 276-288. e8, 2018 | 194 | 2018 |
| Evolutionary conservation of the eumetazoan gene regulatory landscape M Schwaiger, A Schönauer, AF Rendeiro, C Pribitzer, A Schauer, ... Genome research 24 (4), 639-650, 2014 | 187 | 2014 |
| Precursors for nonlymphoid-tissue Treg cells reside in secondary lymphoid organs and are programmed by the transcription factor BATF M Delacher, CD Imbusch, A Hotz-Wagenblatt, JP Mallm, K Bauer, ... Immunity 52 (2), 295-312. e11, 2020 | 185 | 2020 |
| Hyperglycemia induces trained immunity in macrophages and their precursors and promotes atherosclerosis L Edgar, N Akbar, AT Braithwaite, T Krausgruber, H Gallart-Ayala, J Bailey, ... Circulation 144 (12), 961-982, 2021 | 163 | 2021 |
| Chromatin accessibility maps of chronic lymphocytic leukaemia identify subtype-specific epigenome signatures and transcription regulatory networks AF Rendeiro, C Schmidl, JC Strefford, R Walewska, Z Davis, M Farlik, ... Nature communications 7 (1), 11938, 2016 | 162 | 2016 |
| Acute BAF perturbation causes immediate changes in chromatin accessibility S Schick, S Grosche, KE Kohl, D Drpic, MG Jaeger, NC Marella, ... Nature genetics 53 (3), 269-278, 2021 | 138 | 2021 |
| Aryl hydrocarbon receptor contributes to the transcriptional program of IL-10-producing regulatory B cells CJM Piper, EC Rosser, K Oleinika, K Nistala, T Krausgruber, AF Rendeiro, ... Cell reports 29 (7), 1878-1892. e7, 2019 | 138 | 2019 |
| Multimodal analysis of cell-free DNA whole-genome sequencing for pediatric cancers with low mutational burden P Peneder, AM Stütz, D Surdez, M Krumbholz, S Semper, M Chicard, ... Nature communications 12 (1), 3230, 2021 | 134 | 2021 |
| Systematic characterization of BAF mutations provides insights into intracomplex synthetic lethalities in human cancers S Schick, AF Rendeiro, K Runggatscher, A Ringler, B Boidol, M Hinkel, ... Nature genetics 51 (9), 1399-1410, 2019 | 128 | 2019 |
| Epigenetic memory of coronavirus infection in innate immune cells and their progenitors JG Cheong, A Ravishankar, S Sharma, CN Parkhurst, SA Grassmann, ... Cell 186 (18), 3882-3902. e24, 2023 | 93 | 2023 |
| Chromatin mapping and single-cell immune profiling define the temporal dynamics of ibrutinib response in CLL AF Rendeiro, T Krausgruber, N Fortelny, F Zhao, T Penz, M Farlik, ... Nature Communications 11 (1), 577, 2020 | 91 | 2020 |
