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Jan Christian Kässens
Jan Christian Kässens
Research Scientist, Institute of Clinical Molecular Biology, Kiel University
Bestätigte E-Mail-Adresse bei ikmb.uni-kiel.de
Titel
Zitiert von
Zitiert von
Jahr
Genomewide association study of severe Covid-19 with respiratory failure
Severe Covid-19 GWAS Group
New England Journal of Medicine 383 (16), 1522-1534, 2020
18342020
Mapping the human genetic architecture of COVID-19
Writing group Writing group leaders Pathak Gita A. 6 Andrews Shea J. 7 Kanai ...
Nature 600 (7889), 472-477, 2021
7002021
Severe Covid-19 GWAS Group. Genomewide association study of severe Covid-19 with respiratory failure
D Ellinghaus, F Degenhardt, L Bujanda, M Buti, A Albillos, P Invernizzi, ...
N Engl j Med 383 (16), 1522-1534, 2020
1342020
The ABO blood group locus and a chromosome 3 gene cluster associate with SARS-CoV-2 respiratory failure in an Italian-Spanish genome-wide association …
D Ellinghaus, F Degenhardt, L Bujanda, M Buti, A Albillos, P Invernizzi, ...
MedRxiv, 2020.05. 31.20114991, 2020
1092020
Genome-wide association study in 8,956 German individuals identifies influence of ABO histo-blood groups on gut microbiome
MC Rühlemann, BM Hermes, C Bang, S Doms, L Moitinho-Silva, ...
Nature Genetics 53 (2), 147-155, 2021
1052021
Development of a high-resolution NGS-based HLA-typing and analysis pipeline
M Wittig, JA Anmarkrud, JC Kässens, S Koch, M Forster, E Ellinghaus, ...
Nucleic Acids Research 43 (11), e70-e70, 2015
832015
Detailed stratified GWAS analysis for severe COVID-19 in four European populations
F Degenhardt, D Ellinghaus, S Juzenas, J Lerga-Jaso, M Wendorff, ...
Human molecular genetics 31 (23), 3945-3966, 2022
66*2022
Protein-coding variants contribute to the risk of atopic dermatitis and skin-specific gene expression
S Mucha, H Baurecht, N Novak, E Rodríguez, S Bej, G Mayr, H Emmert, ...
Journal of Allergy and Clinical Immunology 145 (4), 1208-1218, 2020
422020
FPGA-based acceleration of detecting statistical epistasis in GWAS
L Wienbrandt, JC Kässens, J González-Domínguez, B Schmidt, ...
Procedia Computer Science 29, 220-230, 2014
342014
Parallelizing epistasis detection in GWAS on FPGA and GPU-accelerated computing systems
J González-Domínguez, L Wienbrandt, JC Kässens, D Ellinghaus, ...
IEEE/ACM transactions on computational biology and bioinformatics 12 (5 …, 2015
332015
High-speed exhaustive 3-locus interaction epistasis analysis on FPGAs
JC Kässens, L Wienbrandt, J González-Domínguez, B Schmidt, ...
Journal of Computational Science 9, 131-136, 2015
322015
1000× faster than PLINK: Combined FPGA and GPU accelerators for logistic regression-based detection of epistasis
L Wienbrandt, JC Kässens, M Hübenthal, D Ellinghaus
Journal of Computational Science 30, 183-193, 2019
292019
UPC++ for bioinformatics: A case study using genome-wide association studies
JC Kässens, J González-Domínguez, L Wienbrandt, B Schmidt
2014 IEEE International Conference on Cluster Computing (CLUSTER), 248-256, 2014
242014
Genome-wide study of a Neolithic Wartberg grave community reveals distinct HLA variation and hunter-gatherer ancestry
A Immel, F Pierini, C Rinne, J Meadows, R Barquera, A Szolek, J Susat, ...
Communications biology 4 (1), 113, 2021
232021
Hybrid CPU/GPU acceleration of detection of 2-SNP epistatic interactions in GWAS
J González-Domínguez, B Schmidt, JC Kässens, L Wienbrandt
Euro-Par 2014 Parallel Processing: 20th International Conference, Porto …, 2014
212014
UBTF::ATXN7L3 gene fusion defines novel B cell precursor ALL subtype with CDX2 expression and need for intensified treatment
L Bastian, AM Hartmann, T Beder, S Hänzelmann, J Kässens, ...
Leukemia 36 (6), 1676-1680, 2022
162022
Large-scale genome-wide association studies on a GPU cluster using a CUDA-accelerated PGAS programming model
J González-Domínguez, JC Kässens, L Wienbrandt, B Schmidt
The International Journal of High Performance Computing Applications 29 (4 …, 2015
162015
BIGwas: Single-command quality control and association testing for multi-cohort and biobank-scale GWAS/PheWAS data
JC Kässens, L Wienbrandt, D Ellinghaus
GigaScience 10 (6), giab047, 2021
122021
A second update on mapping the human genetic architecture of COVID-19
M Kanai, SJ Andrews, M Cordioli, C Stevens, BM Neale, M Daly, A Ganna, ...
Nature 621 (7977), E7-E26, 2023
112023
Combining GPU and FPGA technology for efficient exhaustive interaction analysis in GWAS
JC Kässens, L Wienbrandt, M Schimmler, J González-Domínguez, ...
2016 IEEE 27th International Conference on Application-specific Systems …, 2016
102016
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