| Blind prediction of homo‐and hetero‐protein complexes: The CASP13‐CAPRI experiment MF Lensink, G Brysbaert, N Nadzirin, S Velankar, RAG Chaleil, T Gerguri, ... Proteins: Structure, Function, and Bioinformatics 87 (12), 1200-1221, 2019 | 116 | 2019 |
| Protein secondary structure detection in intermediate-resolution cryo-EM maps using deep learning SR Maddhuri Venkata Subramaniya, G Terashi, D Kihara Nature methods 16 (9), 911-917, 2019 | 78 | 2019 |
| Detecting protein and DNA/RNA structures in cryo-EM maps of intermediate resolution using deep learning X Wang, E Alnabati, TW Aderinwale, SRMV Subramaniya, G Terashi, ... Biophysical Journal 120 (3), 81a, 2021 | 34 | 2021 |
| Analyzing effect of quadruple multiple sequence alignments on deep learning based protein inter-residue distance prediction A Jain, G Terashi, Y Kagaya, SR Maddhuri Venkata Subramaniya, ... Scientific Reports 11 (1), 7574, 2021 | 22 | 2021 |
| Residue-wise local quality estimation for protein models from cryo-EM maps G Terashi, X Wang, SR Maddhuri Venkata Subramaniya, JJG Tesmer, ... Nature methods 19 (9), 1116-1125, 2022 | 21 | 2022 |
| Performance and enhancement of the LZerD protein assembly pipeline in CAPRI 38‐46 C Christoffer, G Terashi, WH Shin, T Aderinwale, ... Proteins: Structure, Function, and Bioinformatics 88 (8), 948-961, 2020 | 15 | 2020 |
| Protein contact map refinement for improving structure prediction using generative adversarial networks SRMV Subramaniya, G Terashi, A Jain, Y Kagaya, D Kihara Bioinformatics 37 (19), 3168, 2021 | 11 | 2021 |
| Protein contact map refinement for improving structure prediction using generative adversarial networks SR Maddhuri Venkata Subramaniya, G Terashi, A Jain, Y Kagaya, ... Bioinformatics 37 (19), 3168-3174, 2021 | 9* | 2021 |
| Super resolution Cryo-EM maps with 3D deep generative networks SRMV Subramaniya, G Terashi, D Kihara Biophysical Journal 120 (3), 283a, 2021 | 9 | 2021 |
| Emap2sec+: detecting protein and DNA/RNA structures in Cryo-EM maps of intermediate resolution using deep learning X Wang, E Alnabati, TW Aderinwale, SRM Venkata Subramaniya, ... bioRxiv, 2020.08. 22.262675, 2020 | 4 | 2020 |
| Emap2sec+: Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning X Wang, E Alnabati, TW Aderinwale, S Subramaniya, G Terashi, D Kihara Acta Crystallogr. Sect. A 77, A84, 2021 | 1 | 2021 |
| De Novo Computational Protein Tertiary Structure Modeling Pipeline for Cryo-EM Maps of Intermediate Resolution D Kihara, G Terashi, SRMV Subramaniya Biophysical Journal 118 (3), 292a, 2020 | 1 | 2020 |
| Protein Secondary Structure Detection in Intermediate-Resolution Cryo-EM Maps using Deep Learning SRMV Subramaniya, G Terashi, D Kihara Biophysical Journal 118 (3), 43a, 2020 | 1 | 2020 |
| Protein Secondary Structure Detection in Intermediate-Resolution Cryo-EM Maps using Deep Learning SRM Venkata Subramaniya, G Terashi, D Kihara Biophysical Journal 118 (3), 43a, 2020 | 1 | 2020 |
| Outcomes of the EMDataResource Cryo-EM Ligand Modeling Challenge C Lawson, A Kryshtafovych, G Pintilie, S Burley, J Cerny, V Chen, ... Research Square, 2024 | | 2024 |
| Outcomes of the EMDataResource Cryo-EM Ligand Modeling Challenge (preprint) C Lawson, A Kryshtafovych, G Pintilie, S Burley, J Cerny, V Chen, ... | | 2024 |
| Enhancing cryo-EM maps with 3D deep generative networks for assisting protein structure modeling SR Maddhuri Venkata Subramaniya, G Terashi, D Kihara Bioinformatics 39 (8), btad494, 2023 | | 2023 |
| DEEP LEARNING ENABLED 3D PROTEIN STRUCTURE MODELING SRMV Subraman Purdue University Graduate School, 2022 | | 2022 |
| Deep learning-based local quality estimation for protein structure models from cryo-EM maps G Terashi, X Wang, SRMV Subramaniya, JJ Tesmer, D Kihara Biophysical Journal 121 (3), 129a, 2022 | | 2022 |
| Automatic extraction of information from obfuscated image regions RC Johnson, B Wardman, SR Maddhuri Venkata Subramaniya US Patent US11080388B2, 2018 | | 2018 |
Genki TerashiAssistant research scientist, Department of Biological Sciences, Purdue UniversityBestätigte E-Mail-Adresse bei purdue.edu
