Michael P H Stumpf
Michael P H Stumpf
Professor of Theoretical Systems Biology, University of Melbourne
Bestätigte E-Mail-Adresse bei unimelb.edu.au
Titel
Zitiert von
Zitiert von
Jahr
Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems
T Toni, D Welch, N Strelkowa, A Ipsen, MPH Stumpf
Journal of the Royal Society Interface 6 (31), 187-202, 2009
12082009
Evolution of pathogenicity and sexual reproduction in eight Candida genomes
G Butler, MD Rasmussen, MF Lin, MAS Santos, S Sakthikumar, CA Munro, ...
Nature 459 (7247), 657-662, 2009
9222009
Estimating the size of the human interactome
MPH Stumpf, T Thorne, E de Silva, R Stewart, HJ An, M Lappe, C Wiuf
Proceedings of the National Academy of Sciences 105 (19), 6959-6964, 2008
7502008
Subnets of scale-free networks are not scale-free: sampling properties of networks
MPH Stumpf, C Wiuf, RM May
Proceedings of the National Academy of Sciences 102 (12), 4221-4224, 2005
5872005
Critical truths about power laws
MPH Stumpf, MA Porter
Science 335 (6069), 665-666, 2012
5362012
Balancing selection at the prion protein gene consistent with prehistoric kurulike epidemics
S Mead, MPH Stumpf, J Whitfield, JA Beck, M Poulter, T Campbell, ...
Science 300 (5619), 640-643, 2003
4142003
Network motifs: structure does not determine function
PJ Ingram, MPH Stumpf, J Stark
BMC genomics 7 (1), 1-12, 2006
3092006
A large fraction of HLA class I ligands are proteasome-generated spliced peptides
J Liepe, F Marino, J Sidney, A Jeko, DE Bunting, A Sette, PM Kloetzel, ...
Science 354 (6310), 354-358, 2016
2622016
Simulation-based model selection for dynamical systems in systems and population biology
T Toni, MPH Stumpf
Bioinformatics 26 (1), 104-110, 2010
2602010
A predominantly indigenous paternal heritage for the Austronesian-speaking peoples of insular Southeast Asia and Oceania
C Capelli, JF Wilson, M Richards, MPH Stumpf, F Gratrix, S Oppenheimer, ...
The American Journal of Human Genetics 68 (2), 432-443, 2001
2452001
Estimating recombination rates from population-genetic data
MPH Stumpf, GAT McVean
Nature Reviews Genetics 4 (12), 959-968, 2003
2402003
AY chromosome census of the British Isles
C Capelli, N Redhead, JK Abernethy, F Gratrix, JF Wilson, T Moen, ...
Current Biology 13 (11), 979-984, 2003
2282003
Managing membrane stress: the phage shock protein (Psp) response, from molecular mechanisms to physiology
N Joly, C Engl, G Jovanovic, M Huvet, T Toni, X Sheng, MPH Stumpf, ...
FEMS microbiology reviews 34 (5), 797-827, 2010
2022010
Phylogenetic diversity of stress signalling pathways in fungi
E Nikolaou, I Agrafioti, M Stumpf, J Quinn, I Stansfield, AJP Brown
BMC Evolutionary Biology 9 (1), 44, 2009
1952009
Sensitivity, robustness, and identifiability in stochastic chemical kinetics models
M Komorowski, MJ Costa, DA Rand, MPH Stumpf
Proceedings of the National Academy of Sciences 108 (21), 8645-8650, 2011
1942011
A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation
J Liepe, P Kirk, S Filippi, T Toni, CP Barnes, MPH Stumpf
Nature protocols 9 (2), 439-456, 2014
1682014
ABC-SysBio—approximate Bayesian computation in Python with GPU support
J Liepe, C Barnes, E Cule, K Erguler, P Kirk, T Toni, MPH Stumpf
Bioinformatics 26 (14), 1797-1799, 2010
1632010
Statistical inference of the time-varying structure of gene-regulation networks
S Lebre, J Becq, F Devaux, MPH Stumpf, G Lelandais
BMC systems biology 4 (1), 130, 2010
1622010
Maximizing the information content of experiments in systems biology
J Liepe, S Filippi, M Komorowski, MPH Stumpf
PLoS Comput Biol 9 (1), e1002888, 2013
1582013
Gene regulatory network inference from single-cell data using multivariate information measures
TE Chan, MPH Stumpf, AC Babtie
Cell systems 5 (3), 251-267. e3, 2017
1452017
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