| The complete sequence of a human genome S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ... Science 376 (6588), 44-53, 2022 | 1814 | 2022 |
| Telomere-to-telomere assembly of a complete human X chromosome KH Miga, S Koren, A Rhie, MR Vollger, A Gershman, A Bzikadze, ... Nature 585 (7823), 79-84, 2020 | 694 | 2020 |
| The structure, function and evolution of a complete human chromosome 8 GA Logsdon, MR Vollger, PH Hsieh, Y Mao, MA Liskovykh, S Koren, ... Nature, 1-7, 2021 | 259 | 2021 |
| Complete genomic and epigenetic maps of human centromeres N Altemose, GA Logsdon, AV Bzikadze, P Sidhwani, SA Langley, ... Science 376 (6588), eabl4178, 2022 | 254 | 2022 |
| The complete sequence of a human Y chromosome A Rhie, S Nurk, M Cechova, SJ Hoyt, DJ Taylor, N Altemose, PW Hook, ... Nature 621 (7978), 344-354, 2023 | 115 | 2023 |
| Automated assembly of centromeres from ultra-long error-prone reads AV Bzikadze, PA Pevzner Nature Biotechnology 38 (11), 1309-1316, 2020 | 69* | 2020 |
| Multiplex de Bruijn graphs enable genome assembly from long, high-fidelity reads A Bankevich, AV Bzikadze, M Kolmogorov, D Antipov, PA Pevzner Nature biotechnology 40 (7), 1075-1081, 2022 | 66 | 2022 |
| Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies AM Mc Cartney, K Shafin, M Alonge, AV Bzikadze, G Formenti, ... Nature methods 19 (6), 687-695, 2022 | 63 | 2022 |
| TandemTools: mapping long reads and assessing/improving assembly quality in extra-long tandem repeats A Mikheenko, AV Bzikadze, A Gurevich, KH Miga, PA Pevzner Bioinformatics 36 (Supplement_1), i75-i83, 2020 | 50* | 2020 |
| Reconstructing antibody repertoires from error-prone immunosequencing reads A Shlemov, S Bankevich, A Bzikadze, MA Turchaninova, Y Safonova, ... The Journal of Immunology 199 (9), 3369-3380, 2017 | 42 | 2017 |
| The string decomposition problem and its applications to centromere analysis and assembly T Dvorkina, AV Bzikadze, PA Pevzner Bioinformatics 36 (Supplement_1), i93-i101, 2020 | 31 | 2020 |
| CentromereArchitect: inference and analysis of the architecture of centromeres T Dvorkina, O Kunyavskaya, AV Bzikadze, I Alexandrov, PA Pevzner Bioinformatics 37 (Supplement_1), i196-i204, 2021 | 18 | 2021 |
| Automated annotation of human centromeres with HORmon O Kunyavskaya, T Dvorkina, AV Bzikadze, I Alexandrov, PA Pevzner Genome Research, gr. 276362.121, 2022 | 15* | 2022 |
| UniAligner: a parameter-free framework for fast sequence alignment AV Bzikadze, PA Pevzner Nature Methods 20 (9), 1346-1354, 2023 | 8* | 2023 |
| A scalable model for simulating multi-round antibody evolution and benchmarking of clonal tree reconstruction methods C Zhang, AV Bzikadze, Y Safonova, S Mirarab Frontiers in immunology 13, 1014439, 2022 | 7* | 2022 |
| Fast and accurate mapping of long reads to complete genome assemblies with VerityMap AV Bzikadze, A Mikheenko, PA Pevzner Genome Research 32 (11-12), 2107-2118, 2022 | 7 | 2022 |
| Reconstructing antibody repertoires from error-prone immunosequencing datasets A Shlemov, S Bankevich, A Bzikadze, MA Turchaninova, Y Safonova, ... Research in Computational Molecular Biology, 396, 0 | 2 | |
| On some statistical properties of the “Book Stack” transformation AV Bzikadze, VV Nekrutkin Vestnik St. Petersburg University: Mathematics 49, 305-312, 2016 | 1 | 2016 |
| A complete reference genome improves short-read analysis of human genetic variation CHM over GRCh38, S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, ... GENOMIC VARIANT CALLING AT SCALE ACROSS HUMAN POPULATIONS, 57, 2023 | | 2023 |
| Human centromeres: from initial assemblies to structural and evolutionary analysis AV Bzikadze University of California, San Diego, 2022 | | 2022 |
Alla MikheenkoPostdoctoral Research Fellow, University College of LondonBestätigte E-Mail-Adresse bei ucl.ac.uk
