tristan cordier
tristan cordier
department of genetics and evolution, university of geneva
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Zitiert von
Zitiert von
The future of biotic indices in the ecogenomic era: Integrating (e) DNA metabarcoding in biological assessment of aquatic ecosystems
J Pawlowski, M Kelly-Quinn, F Altermatt, L Apothéloz-Perret-Gentil, P Beja, ...
Science of the Total Environment 637, 1295-1310, 2018
The composition of phyllosphere fungal assemblages of European beech (Fagus sylvatica) varies significantly along an elevation gradient
T Cordier, C Robin, X Capdevielle, O Fabreguettes, ML Desprez‐Loustau, ...
New Phytologist 196 (2), 510-519, 2012
Spatial variability of phyllosphere fungal assemblages: genetic distance predominates over geographic distance in a European beech stand (Fagus sylvatica)
T Cordier, C Robin, X Capdevielle, ML Desprez-Loustau, C Vacher
Fungal Ecology 5 (5), 509-520, 2012
Leaf and root-associated fungal assemblages do not follow similar elevational diversity patterns
A Coince, T Cordier, J Lengellé, E Defossez, C Vacher, C Robin, M Buée, ...
PloS one 9 (6), e100668, 2014
Predicting the ecological quality status of marine environments from eDNA metabarcoding data using supervised machine learning
T Cordier, P Esling, F Lejzerowicz, J Visco, A Ouadahi, C Martins, ...
Environmental Science & Technology 51 (16), 9118-9126, 2017
Embracing environmental genomics and machine learning for routine biomonitoring
T Cordier, A Lanzén, L Apothéloz-Perret-Gentil, T Stoeck, J Pawlowski
Trends in microbiology 27 (5), P387-397, 2019
Supervised machine learning outperforms taxonomy‐based environmental DNA metabarcoding applied to biomonitoring
T Cordier, D Forster, Y Dufresne, CIM Martins, T Stoeck, J Pawlowski
Molecular Ecology Resources 18, 1381– 1391, 2018
Environmental DNA metabarcoding of benthic bacterial communities indicates the benthic footprint of salmon aquaculture
T Stoeck, L Frühe, D Forster, T Cordier, CIM Martins, J Pawlowski
Marine pollution bulletin 127, 139-149, 2018
Benthic monitoring of salmon farms in Norway using foraminiferal metabarcoding
J Pawlowski, P Esling, F Lejzerowicz, T Cordier, JA Visco, CIM Martins, ...
Aquaculture Environment Interactions 8, 371-386, 2016
SLIM: a flexible web application for the reproducible processing of environmental DNA metabarcoding data
Y Dufresne, F Lejzerowicz, LA Perret-Gentil, J Pawlowski, T Cordier
BMC bioinformatics 20 (1), 88, 2019
A comparison of different ciliate metabarcode genes as bioindicators for environmental impact assessments of salmon aquaculture
D Forster, S Filker, R Kochems, HW Breiner, T Cordier, J Pawlowski, ...
Journal of Eukaryotic Microbiology 66 (2), 294-308, 2018
Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap
T Cordier, LA Sáez, L Apotheloz-Perret-Gentil, E Aylagas, DA Bohan, ...
Molecular Ecology, 10.1111/mec.15472, 2020
Development and implementation of eco-genomic tools for aquatic ecosystem biomonitoring: the SYNAQUA French-Swiss program
E Lefrançois, L Apothéloz-Perret-Gentil, P Blancher, S Botreau, ...
Environmental Science and Pollution Research 25 (34), 33858-33866, 2018
Key questions for next-generation biomonitoring
A Makiola, Z Greg, DJ Baird, A Matthew, S Philip, A Bouchez, G Brennan, ...
Frontiers in Environmental Science, 2019
Multi-marker eDNA metabarcoding survey to assess the environmental impact of three offshore gas platforms in the North Adriatic Sea (Italy)
T Cordier, F Frontalini, K Cermakova, L Apothéloz-Perret-Gentil, M Treglia, ...
Marine environmental research 146, 24-34, 2019
Phyllosphere fungal communities differentiate more thoroughly than bacterial communities along an elevation gradient
C Vacher, T Cordier, J Vallance
Microbial Ecology 72 (1), 1-3, 2016
Supervised machine learning is superior to indicator value inference in monitoring the environmental impacts of salmon aquaculture using eDNA metabarcodes
L Frühe, T Cordier, V Dully, HW Breiner, G Lentendu, J Pawlowski, ...
Molecular Ecology, 10.1111/mec.15434, 2020
Emerging Phytophthora and Pythium species in Polish declining forests.
T Cordier, L Belbahri, G Calmin, T Oszako, J Nowakowska, F Lefort
COST Action: Established and emerging Phytophthora: increasing threats to …, 2009
Bacterial communities’ taxonomic and functional turnovers both accurately predict marine benthic ecological quality status
T Cordier
Environmental DNA 2, 175-183, 2020
BBI: an R package for the computation of benthic biotic indices from composition data
T Cordier, J Pawlowski
Metabarcoding and Metagenomics 2, e25649, 2018
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