Yupeng He
Yupeng He
Research associate, Salk Institute
Bestätigte E-Mail-Adresse bei ucsd.edu - Startseite
Titel
Zitiert von
Zitiert von
Jahr
Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317-330, 2015
36952015
Human body epigenome maps reveal noncanonical DNA methylation variation
MD Schultz, Y He, JW Whitaker, M Hariharan, EA Mukamel, D Leung, ...
Nature 523 (7559), 212-216, 2015
4282015
Epigenomic diversity in a global collection of Arabidopsis thaliana accessions
T Kawakatsu, SC Huang, F Jupe, E Sasaki, RJ Schmitz, MA Urich, ...
Cell 166 (2), 492-505, 2016
3262016
Abnormalities in human pluripotent cells due to reprogramming mechanisms
H Ma, R Morey, RC O'Neil, Y He, B Daughtry, MD Schultz, M Hariharan, ...
Nature 511 (7508), 177-183, 2014
3012014
Molecular criteria for defining the naive human pluripotent state
TW Theunissen, M Friedli, Y He, E Planet, RC O’Neil, S Markoulaki, ...
Cell stem cell 19 (4), 502-515, 2016
2752016
Single-cell methylomes identify neuronal subtypes and regulatory elements in mammalian cortex
C Luo, CL Keown, L Kurihara, J Zhou, Y He, J Li, R Castanon, J Lucero, ...
Science 357 (6351), 600-604, 2017
2182017
Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population
RJ Schmitz, Y He, O Valdés-López, SM Khan, T Joshi, MA Urich, JR Nery, ...
Genome research 23 (10), 1663-1674, 2013
2112013
An alternative pluripotent state confers interspecies chimaeric competency
J Wu, D Okamura, M Li, K Suzuki, C Luo, L Ma, Y He, Z Li, C Benner, ...
Nature 521 (7552), 316-321, 2015
1772015
Characterization of Greater Middle Eastern genetic variation for enhanced disease gene discovery
EM Scott, A Halees, Y Itan, EG Spencer, Y He, MA Azab, SB Gabriel, ...
Nature genetics 48 (9), 1071-1076, 2016
1702016
Non-CG methylation in the human genome
Y He, JR Ecker
Annual review of genomics and human genetics 16, 55-77, 2015
1392015
The developmental potential of iPSCs is greatly influenced by reprogramming factor selection
Y Buganim, S Markoulaki, N van Wietmarschen, H Hoke, T Wu, K Ganz, ...
Cell stem cell 15 (3), 295-309, 2014
1312014
Proteogenomic database construction driven from large scale RNA-seq data
S Woo, SW Cha, G Merrihew, Y He, N Castellana, C Guest, M MacCoss, ...
Journal of proteome research 13 (1), 21-28, 2014
1082014
An automated proteogenomic method uses mass spectrometry to reveal novel genes in Zea mays
NE Castellana, Z Shen, Y He, JW Walley, SP Briggs, V Bafna
Molecular & Cellular Proteomics 13 (1), 157-167, 2014
762014
Improved regulatory element prediction based on tissue-specific local epigenomic signatures
Y He, DU Gorkin, DE Dickel, JR Nery, RG Castanon, AY Lee, Y Shen, ...
Proceedings of the National Academy of Sciences 114 (9), E1633-E1640, 2017
592017
Functional human oocytes generated by transfer of polar body genomes
H Ma, RC O’Neil, NM Gutierrez, M Hariharan, ZZ Zhang, Y He, ...
Cell stem cell 20 (1), 112-119, 2017
522017
Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 583 (7818), 699-710, 2020
482020
An atlas of dynamic chromatin landscapes in mouse fetal development
DU Gorkin, I Barozzi, Y Zhao, Y Zhang, H Huang, AY Lee, B Li, J Chiou, ...
Nature 583 (7818), 744-751, 2020
25*2020
Spatiotemporal DNA methylome dynamics of the developing mouse fetus
Y He, M Hariharan, DU Gorkin, DE Dickel, C Luo, RG Castanon, JR Nery, ...
Nature 583 (7818), 752-759, 2020
18*2020
Epigenetic silencing of a multifunctional plant stress regulator
M Zander, BC Willige, Y He, TA Nguyen, AE Langford, R Nehring, ...
Elife 8, e47835, 2019
72019
MOST+: A de novo motif finding approach combining genomic sequence and heterogeneous genome-wide signatures
Y Zhang, Y He, G Zheng, C Wei
BMC genomics 16 (S7), S13, 2015
72015
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