John R McPherson
John R McPherson
Associate in Research, Centre for Computational Biology, Duke-NUS Graduate Medical School
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Exome sequencing of gastric adenocarcinoma identifies recurrent somatic mutations in cell adhesion and chromatin remodeling genes
ZJ Zang, I Cutcutache, SL Poon, SL Zhang, JR McPherson, J Tao, ...
Nature genetics 44 (5), 570-574, 2012
The repertoire of mutational signatures in human cancer
LB Alexandrov, J Kim, NJ Haradhvala, MN Huang, AWT Ng, Y Wu, A Boot, ...
Nature 578 (7793), 94-101, 2020
Exome sequencing of liver fluke–associated cholangiocarcinoma
CK Ong, C Subimerb, C Pairojkul, S Wongkham, I Cutcutache, W Yu, ...
Nature genetics 44 (6), 690-693, 2012
Exome sequencing identifies distinct mutational patterns in liver fluke–related and non-infection-related bile duct cancers
W Chan-On, ML Nairismägi, CK Ong, WK Lim, S Dima, C Pairojkul, ...
Nature genetics 45 (12), 1474, 2013
Whole-genome and epigenomic landscapes of etiologically distinct subtypes of cholangiocarcinoma
A Jusakul, I Cutcutache, CH Yong, JQ Lim, MN Huang, N Padmanabhan, ...
Cancer discovery 7 (10), 1116-1135, 2017
Genome-wide mutational signatures of aristolochic acid and its application as a screening tool
SL Poon, ST Pang, JR McPherson, W Yu, KK Huang, P Guan, WH Weng, ...
Science translational medicine 5 (197), 197ra101-197ra101, 2013
Exome sequencing identifies highly recurrent MED12 somatic mutations in breast fibroadenoma
WK Lim, CK Ong, J Tan, AA Thike, CCY Ng, V Rajasegaran, SS Myint, ...
Nature genetics 46 (8), 877-880, 2014
The repertoire of mutational signatures in human cancer
LB Alexandrov, J Kim, NJ Haradhvala, MN Huang, AWT Ng, Y Wu, A Boot, ...
BioRxiv, 322859, 2019
Genomic landscapes of breast fibroepithelial tumors
J Tan, CK Ong, WK Lim, CCY Ng, AA Thike, LM Ng, V Rajasegaran, ...
Nature genetics 47 (11), 1341-1345, 2015
The NF1 gene revisited–from bench to bedside
YS Yap, JR McPherson, CK Ong, SG Rozen, BT Teh, ASG Lee, DF Callen
Oncotarget 5 (15), 5873, 2014
Mutation signatures implicate aristolochic acid in bladder cancer development
SL Poon, MN Huang, Y Choo, JR McPherson, W Yu, HL Heng, A Gan, ...
Genome medicine 7 (1), 1-10, 2015
MSIseq: software for assessing microsatellite instability from catalogs of somatic mutations
MN Huang, JR McPherson, I Cutcutache, BT Teh, P Tan, SG Rozen
Scientific reports 5 (1), 1-10, 2015
Whole-Exome Sequencing Studies of Parathyroid Carcinomas Reveal Novel PRUNE2 Mutations, Distinctive Mutational Spectra Related to APOBEC-Catalyzed …
W Yu, JR McPherson, M Stevenson, R van Eijk, HL Heng, P Newey, ...
The Journal of Clinical Endocrinology & Metabolism 100 (2), E360-E364, 2015
Mutation signatures of carcinogen exposure: genome-wide detection and new opportunities for cancer prevention
SL Poon, JR McPherson, P Tan, BT Teh, SG Rozen
Genome medicine 6 (3), 1-14, 2014
Mutational landscapes of tongue carcinoma reveal recurrent mutations in genes of therapeutic and prognostic relevance
AL Vettore, K Ramnarayanan, G Poore, K Lim, CK Ong, KK Huang, ...
Genome medicine 7 (1), 1-15, 2015
Usage of the MELDEX digital music library
JR McPherson, D Bainbridge
Proceedings of the International Symposium on Music Information Retrieval, 19-20, 2001
Greenstone: A platform for distributed digital library applications
D Bainbridge, G Buchanan, J McPherson, S Jones, A Mahoui, IH Witten
International Conference on Theory and Practice of Digital Libraries, 137-148, 2001
High-depth sequencing of over 750 genes supports linear progression of primary tumors and metastases in most patients with liver-limited metastatic colorectal cancer
IB Tan, S Malik, K Ramnarayanan, JR McPherson, DL Ho, Y Suzuki, ...
Genome biology 16 (1), 1-16, 2015
Massively parallel sequencing of patients with intellectual disability, congenital anomalies and/or autism spectrum disorders with a targeted gene panel
M Brett, J McPherson, ZJ Zang, A Lai, ES Tan, I Ng, LC Ong, B Cham, ...
PloS one 9 (4), e93409, 2014
Exome sequencing reveals recurrent REV3L mutations in cisplatin-resistant squamous cell carcinoma of head and neck
KK Huang, KW Jang, S Kim, HS Kim, SM Kim, HJ Kwon, HR Kim, HJ Yun, ...
Scientific reports 6 (1), 1-10, 2016
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