Jake Yeung
Jake Yeung
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Zitiert von
Zitiert von
The mouse microbiome is required for sex-specific diurnal rhythms of gene expression and metabolism
BD Weger, C Gobet, J Yeung, E Martin, S Jimenez, B Betrisey, F Foata, ...
Cell metabolism 29 (2), 362-382. e8, 2019
Transcription factor activity rhythms and tissue-specific chromatin interactions explain circadian gene expression across organs
J Yeung, J Mermet, C Jouffe, J Marquis, A Charpagne, F Gachon, F Naef
Genome research 28 (2), 182-191, 2018
Clock-dependent chromatin topology modulates circadian transcription and behavior
J Mermet, J Yeung, C Hurni, D Mauvoisin, K Gustafson, C Jouffe, ...
Genes & development 32 (5-6), 347-358, 2018
Heterogeneity in the inter-tumor transcriptome of high risk prostate cancer
AW Wyatt, F Mo, K Wang, B McConeghy, S Brahmbhatt, L Jong, ...
Genome biology 15 (8), 1-14, 2014
Sleep–wake-driven and circadian contributions to daily rhythms in gene expression and chromatin accessibility in the murine cortex
CN Hor, J Yeung, M Jan, Y Emmenegger, J Hubbard, I Xenarios, F Naef, ...
Proceedings of the National Academy of Sciences 116 (51), 25773-25783, 2019
Circadian clock-dependent and-independent posttranscriptional regulation underlies temporal mRNA accumulation in mouse liver
J Wang, L Symul, J Yeung, C Gobet, J Sobel, S Lück, PO Westermark, ...
Proceedings of the National Academy of Sciences 115 (8), E1916-E1925, 2018
Rhythms of the genome: circadian dynamics from chromatin topology, tissue-specific gene expression, to behavior
J Yeung, F Naef
Trends in Genetics 34 (12), 915-926, 2018
HIT'nDRIVE: patient-specific multidriver gene prioritization for precision oncology
R Shrestha, E Hodzic, T Sauerwald, P Dao, K Wang, J Yeung, ...
Genome research 27 (9), 1573-1588, 2017
Systems chronobiology: global analysis of gene regulation in a 24-hour periodic world
J Mermet, J Yeung, F Naef
Cold Spring Harbor perspectives in biology 9 (3), a028720, 2017
Cross-regulatory circuits linking inflammation, high-fat diet, and the circadian clock
F Gachon, J Yeung, F Naef
Genes & development 32 (21-22), 1359-1360, 2018
Single-cell sortChIC identifies hierarchical chromatin dynamics during hematopoiesis
P Zeller, J Yeung, H Viñas Gaza, BA de Barbanson, V Bhardwaj, ...
Nature Genetics, 1-13, 2022
Oscillating and stable genome topologies underlie hepatic physiological rhythms during the circadian cycle
J Mermet, J Yeung, F Naef
PLoS Genetics 17 (2), e1009350, 2021
scChIX-seq infers dynamic relationships between histone modifications in single cells
J Yeung, M Florescu, P Zeller, BA de Barbanson, MD Wellenstein, ...
Nature Biotechnology, 1-11, 2023
HIT’nDRIVE: multi-driver gene prioritization based on hitting time
R Shrestha, E Hodzic, J Yeung, K Wang, T Sauerwald, P Dao, ...
International Conference on Research in Computational Molecular Biology, 293-306, 2014
The circadian oscillator analysed at the single‐transcript level
NE Phillips, A Hugues, J Yeung, E Durandau, D Nicolas, F Naef
Molecular systems biology 17 (3), e10135, 2021
Hierarchical chromatin regulation during blood formation uncovered by single cell sortChIC
P Zeller, J Yeung, BA de Barbanson, HV Gaza, M Florescu, ...
bioRxiv, 440606, 2021
Deconvolving multiplexed histone modifications in single cells
J Yeung, M Florescu, P Zeller, BA de Barbanson, A van Oudenaarden
bioRxiv, 440629, 2021
Economic and environmental analysis of a green energy hub with energy storage under fixed and variable pricing structures
DV Lanen, J Cocking, SB Walker, M Fowler, R Fraser, SB Young, ...
International Journal of Process Systems Engineering 3 (1-3), 158-180, 2015
Learning relationships between histone modifications in single cells
J Yeung, M Florescu, P Zeller, BA de Barbanson, MD Wellenstein, ...
NeurIPS 2022 Workshop on Learning Meaningful Representations of Life, 2022
Tissue-specific circadian transcriptional regulation
J Yeung
EPFL, 2019
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