| Stochasticity in gene expression in a cell-sized compartment K Nishimura, S Tsuru, H Suzuki, T Yomo ACS Synthetic Biology 4 (5), 566-576, 2015 | 68 | 2015 |
| Mutation accumulation under UV radiation in Escherichia coli A Shibai, Y Takahashi, Y Ishizawa, D Motooka, S Nakamura, BW Ying, ... Scientific reports 7 (1), 14531, 2017 | 66 | 2017 |
| Noisy cell growth rate leads to fluctuating protein concentration in bacteria S Tsuru, J Ichinose, A Kashiwagi, BW Ying, K Kaneko, T Yomo Physical biology 6 (3), 036015, 2009 | 59 | 2009 |
| Density-dependent recycling promotes the long-term survival of bacterial populations during periods of starvation S Takano, BJ Pawlowska, I Gudelj, T Yomo, S Tsuru MBio 8 (1), 10.1128/mbio. 02336-16, 2017 | 50 | 2017 |
| Growth rate-coordinated transcriptome reorganization in bacteria Y Matsumoto, Y Murakami, S Tsuru, BW Ying, T Yomo BMC genomics 14, 1-10, 2013 | 47 | 2013 |
| Construction of Escherichia coli gene expression level perturbation collection A Kashiwagi, T Sakurai, S Tsuru, BW Ying, K Mori, T Yomo Metabolic engineering 11 (1), 56-63, 2009 | 32 | 2009 |
| Adaptation by stochastic switching of a monostable genetic circuit in Escherichia coli S Tsuru, N Yasuda, Y Murakami, J Ushioda, A Kashiwagi, S Suzuki, ... Molecular systems biology 7 (1), 493, 2011 | 28 | 2011 |
| The propagation of perturbations in rewired bacterial gene networks R Baumstark, S Hänzelmann, S Tsuru, Y Schaerli, M Francesconi, ... Nature communications 6 (1), 10105, 2015 | 27 | 2015 |
| Directed evolution of cell size in Escherichia coli M Yoshida, S Tsuru, N Hirata, S Seno, H Matsuda, BW Ying, T Yomo BMC evolutionary biology 14, 1-12, 2014 | 23 | 2014 |
| Evolutionary consequence of a trade-off between growth and maintenance along with ribosomal damages BW Ying, T Honda, S Tsuru, S Seno, H Matsuda, Y Kazuta, T Yomo PLoS One 10 (8), e0135639, 2015 | 20 | 2015 |
| Nutrient‐dependent growth defects and mutability of mutators in Escherichia coli Y Ishizawa, BW Ying, S Tsuru, T Yomo Genes to cells 20 (1), 68-76, 2015 | 20 | 2015 |
| Gene expression scaled by distance to the genome replication site BW Ying, S Tsuru, S Seno, H Matsuda, T Yomo Molecular BioSystems 10 (3), 375-379, 2014 | 18 | 2014 |
| Molecular clock of neutral mutations in a fitness-increasing evolutionary process T Kishimoto, BW Ying, S Tsuru, L Iijima, S Suzuki, T Hashimoto, A Oyake, ... PLoS genetics 11 (7), e1005392, 2015 | 17 | 2015 |
| Global coordination in adaptation to gene rewiring Y Murakami, Y Matsumoto, S Tsuru, BW Ying, T Yomo Nucleic acids research 43 (2), 1304-1316, 2015 | 17 | 2015 |
| Stochastic Switching Induced Adaptation in a Starved Escherichia coli Population Y Shimizu, S Tsuru, Y Ito, BW Ying, T Yomo PLoS One 6 (9), e23953, 2011 | 17 | 2011 |
| A reduced genome decreases the host carrying capacity for foreign DNA Y Akeno, BW Ying, S Tsuru, T Yomo Microbial cell factories 13, 1-9, 2014 | 16 | 2014 |
| Experimental demonstration of operon formation catalyzed by insertion sequence Y Kanai, S Tsuru, C Furusawa Nucleic Acids Research 50 (3), 1673-1686, 2022 | 13 | 2022 |
| Bacterial cells carrying synthetic dual-function operon survived starvation Y Matsumoto, Y Ito, S Tsuru, BW Ying, T Yomo BioMed Research International 2011, 2011 | 10 | 2011 |
| Genomic confirmation of nutrient‐dependent mutability of mutators in Escherichia coli S Tsuru, Y Ishizawa, A Shibai, Y Takahashi, D Motooka, S Nakamura, ... Genes to Cells 20 (12), 972-981, 2015 | 9 | 2015 |
| Inference of transcriptome signatures of Escherichia coli in long-term stationary phase S Takano, H Takahashi, Y Yama, R Miyazaki, C Furusawa, S Tsuru Scientific Reports 13 (1), 5647, 2023 | 4 | 2023 |
