Manching Ku
Manching Ku
Faculty of Medicine, University of Freiburg
Verified email at - Homepage
Cited by
Cited by
An integrated encyclopedia of DNA elements in the human genome.
BE Bernstein, E Birney, I Dunham, ED Green, C Gunter, M Snyder
Nature 489 (7414), 57, 2012
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
TS Mikkelsen, M Ku, DB Jaffe, B Issac, E Lieberman, G Giannoukos, ...
Nature 448 (7153), 553-560, 2007
In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state
M Wernig, A Meissner, R Foreman, T Brambrink, M Ku, K Hochedlinger, ...
nature 448 (7151), 318-324, 2007
Mapping and analysis of chromatin state dynamics in nine human cell types
J Ernst, P Kheradpour, TS Mikkelsen, N Shoresh, LD Ward, CB Epstein, ...
Nature 473 (7345), 43-49, 2011
Dissecting direct reprogramming through integrative genomic analysis
TS Mikkelsen, J Hanna, X Zhang, M Ku, M Wernig, P Schorderet, ...
Nature 454 (7200), 49-55, 2008
A user's guide to the encyclopedia of DNA elements (ENCODE)
RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ...
PLoS Biology 9 (4), e1001046, 2011
Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains
M Ku, RP Koche, E Rheinbay, EM Mendenhall, M Endoh, TS Mikkelsen, ...
PLoS genetics 4 (10), e1000242, 2008
Directly reprogrammed human neurons retain aging-associated transcriptomic signatures and reveal age-related nucleocytoplasmic defects
J Mertens, ACM Paquola, M Ku, E Hatch, L Böhnke, S Ladjevardi, ...
Cell stem cell 17 (6), 705-718, 2015
Jarid2 and PRC2, partners in regulating gene expression
G Li, R Margueron, M Ku, P Chambon, BE Bernstein, D Reinberg
Genes & development 24 (4), 368-380, 2010
GC-rich sequence elements recruit PRC2 in mammalian ES cells
EM Mendenhall, RP Koche, T Truong, VW Zhou, B Issac, AS Chi, M Ku, ...
PLoS genetics 6 (12), e1001244, 2010
Reprogramming factor expression initiates widespread targeted chromatin remodeling
RP Koche, ZD Smith, M Adli, H Gu, M Ku, A Gnirke, BE Bernstein, ...
Cell stem cell 8 (1), 96-105, 2011
An epigenetic mechanism of resistance to targeted therapy in T cell acute lymphoblastic leukemia
B Knoechel, JE Roderick, KE Williamson, J Zhu, JG Lohr, MJ Cotton, ...
Nature genetics 46 (4), 364-370, 2014
SAM domain polymerization links subnuclear clustering of PRC1 to gene silencing
K Isono, TA Endo, M Ku, D Yamada, R Suzuki, J Sharif, T Ishikura, ...
Developmental cell 26 (6), 565-577, 2013
Control of phenotypic plasticity of smooth muscle cells by bone morphogenetic protein signaling through the myocardin-related transcription factors
G Lagna, MM Ku, PH Nguyen, NA Neuman, BN Davis, A Hata
Journal of Biological Chemistry 282 (51), 37244-37255, 2007
Negative regulation of the Wnt–β-catenin pathway by the transcriptional repressor HBP1
EM Sampson, ZK Haque, MC Ku, SG Tevosian, C Albanese, RG Pestell, ...
The EMBO journal 20 (16), 4500-4511, 2001
H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions
M Ku, RP Jaffe Jacob D, Koche, E Rheinbay, M Endoh, H Koseki, ...
Genome Biology 13, R85, 2012
Pathological priming causes developmental gene network heterochronicity in autistic subject-derived neurons
ST Schafer, A Paquola, S Stern, D Gosselin, M Ku, M Pena, TJM Kuret, ...
Nature neuroscience 22 (2), 243-255, 2019
Chromatin profiling by directly sequencing small quantities of immunoprecipitated DNA
A Goren, F Ozsolak, N Shoresh, M Ku, M Adli, C Hart, M Gymrek, O Zuk, ...
Nature methods 7 (1), 47-49, 2010
Differentiation of Inflammation-responsive Astrocytes from Glial Progenitors Generated from Human Induced Pluripotent Stem Cells
S Renata, KC Vadodaria, BN Jaeger, M Arianna, S Lefcochilos-Fogelquist, ...
Stem Cell Report 8 (6), 1757-1769, 2017
Efficient generation of CA3 neurons from human pluripotent stem cells enables modeling of hippocampal connectivity in vitro
A Sarkar, A Mei, ACM Paquola, S Stern, C Bardy, JR Klug, S Kim, ...
Cell stem cell 22 (5), 684-697. e9, 2018
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