| An integrated encyclopedia of DNA elements in the human genome. BE Bernstein, E Birney, I Dunham, ED Green, C Gunter, M Snyder Nature 489 (7414), 57, 2012 | 9606* | 2012 |
| Genome-wide maps of chromatin state in pluripotent and lineage-committed cells TS Mikkelsen, M Ku, DB Jaffe, B Issac, E Lieberman, G Giannoukos, ... Nature 448 (7153), 553-560, 2007 | 3898 | 2007 |
| In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state M Wernig, A Meissner, R Foreman, T Brambrink, M Ku, K Hochedlinger, ... Nature 448 (7151), 318-324, 2007 | 3105 | 2007 |
| Mapping and analysis of chromatin state dynamics in nine human cell types J Ernst, P Kheradpour, TS Mikkelsen, N Shoresh, LD Ward, CB Epstein, ... Nature 473 (7345), 43-49, 2011 | 2376 | 2011 |
| Dissecting direct reprogramming through integrative genomic analysis TS Mikkelsen, J Hanna, X Zhang, M Ku, M Wernig, P Schorderet, ... Nature 454 (7200), 49-55, 2008 | 1515 | 2008 |
| A user's guide to the encyclopedia of DNA elements (ENCODE) RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ... PLoS Biology 9 (4), e1001046, 2011 | 1112 | 2011 |
| Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains M Ku, RP Koche, E Rheinbay, EM Mendenhall, M Endoh, TS Mikkelsen, ... PLoS genetics 4 (10), 2008 | 919 | 2008 |
| Jarid2 and PRC2, partners in regulating gene expression G Li, R Margueron, M Ku, P Chambon, BE Bernstein, D Reinberg Genes & development 24 (4), 368-380, 2010 | 402 | 2010 |
| GC-rich sequence elements recruit PRC2 in mammalian ES cells EM Mendenhall, RP Koche, T Truong, VW Zhou, B Issac, AS Chi, M Ku, ... PLoS genetics 6 (12), e1001244, 2010 | 347 | 2010 |
| Reprogramming factor expression initiates widespread targeted chromatin remodeling RP Koche, ZD Smith, M Adli, H Gu, M Ku, A Gnirke, BE Bernstein, ... Cell stem cell 8 (1), 96-105, 2011 | 339 | 2011 |
| Directly reprogrammed human neurons retain aging-associated transcriptomic signatures and reveal age-related nucleocytoplasmic defects J Mertens, ACM Paquola, M Ku, E Hatch, L Böhnke, S Ladjevardi, ... Cell stem cell 17 (6), 705-718, 2015 | 263 | 2015 |
| An epigenetic mechanism of resistance to targeted therapy in T cell acute lymphoblastic leukemia B Knoechel, JE Roderick, KE Williamson, J Zhu, JG Lohr, MJ Cotton, ... Nature genetics 46 (4), 364-370, 2014 | 219 | 2014 |
| Negative regulation of the Wnt–β‐catenin pathway by the transcriptional repressor HBP1 EM Sampson, ZK Haque, MC Ku, SG Tevosian, C Albanese, RG Pestell, ... The EMBO journal 20 (16), 4500-4511, 2001 | 163 | 2001 |
| Control of phenotypic plasticity of smooth muscle cells by bone morphogenetic protein signaling through the myocardin-related transcription factors G Lagna, MM Ku, PH Nguyen, NA Neuman, BN Davis, A Hata Journal of Biological Chemistry 282 (51), 37244-37255, 2007 | 159 | 2007 |
| SAM domain polymerization links subnuclear clustering of PRC1 to gene silencing K Isono, TA Endo, M Ku, D Yamada, R Suzuki, J Sharif, T Ishikura, ... Developmental cell 26 (6), 565-577, 2013 | 149 | 2013 |
| Chromatin profiling by directly sequencing small quantities of immunoprecipitated DNA A Goren, F Ozsolak, N Shoresh, M Ku, M Adli, C Hart, M Gymrek, O Zuk, ... Nature methods 7 (1), 47-49, 2010 | 132 | 2010 |
| H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions M Ku, RP Jaffe Jacob D, Koche, E Rheinbay, M Endoh, H Koseki, ... Genome Biology 13, R85, 2012 | 118 | 2012 |
| Wilms tumor chromatin profiles highlight stem cell properties and a renal developmental network AP Aiden, MN Rivera, E Rheinbay, M Ku, EJ Coffman, TT Truong, ... Cell stem cell 6 (6), 591-602, 2010 | 73 | 2010 |
| In silico abstraction of zinc finger nuclease cleavage profiles reveals an expanded landscape of off-target sites JD Sander, CL Ramirez, SJ Linder, V Pattanayak, N Shoresh, M Ku, ... Nucleic acids research 41 (19), e181-e181, 2013 | 72 | 2013 |
| OAZ regulates bone morphogenetic protein signaling through Smad6 activation M Ku, S Howard, W Ni, G Lagna, A Hata Journal of Biological Chemistry 281 (8), 5277-5287, 2006 | 55 | 2006 |
Bradley BernsteinProfessor of Pathology, Harvard UniversityVerified email at broadinstitute.org
