EASE-MM: sequence-based prediction of mutation-induced stability changes with feature-based multiple models L Folkman, B Stantic, A Sattar, Y Zhou Journal of molecular biology 428 (6), 1394-1405, 2016 | 130 | 2016 |
Circadian rhythm influences induction of trained immunity by BCG vaccination LCJ de Bree, VP Mourits, VACM Koeken, SJ Moorlag, R Janssen, ... The Journal of clinical investigation 130 (10), 5603-5617, 2020 | 120 | 2020 |
Neighbor-based intrusion detection for wireless sensor networks A Stetsko, L Folkman, V Matyáš 2010 6th International Conference on Wireless and Mobile Communications, 420-425, 2010 | 107* | 2010 |
Kernelized rank learning for personalized drug recommendation X He, L Folkman, K Borgwardt Bioinformatics 34 (16), 2808–2816, 2018 | 73 | 2018 |
DDIG-in: detecting disease-causing genetic variations due to frameshifting indels and nonsense mutations employing sequence and structural properties at nucleotide and protein … L Folkman, Y Yang, Z Li, B Stantic, A Sattar, M Mort, DN Cooper, Y Liu, ... Bioinformatics 31 (10), 1599-1606, 2015 | 67 | 2015 |
Investigating DNA‐, RNA‐, and protein‐based features as a means to discriminate pathogenic synonymous variants M Livingstone, L Folkman, Y Yang, P Zhang, M Mort, DN Cooper, Y Liu, ... Human mutation 38 (10), 1336-1347, 2017 | 50 | 2017 |
Feature-based multiple models improve classification of mutation-induced stability changes L Folkman, B Stantic, A Sattar BMC genomics 15, 1-11, 2014 | 20 | 2014 |
Evaluating the predictions of the protein stability change upon single amino acid substitutions for the FXN CAGI5 challenge C Savojardo, M Petrosino, G Babbi, S Bovo, C Corbi‐Verge, R Casadio, ... Human mutation 40 (9), 1392-1399, 2019 | 19 | 2019 |
Assessment of methods for predicting the effects of PTEN and TPMT protein variants V Pejaver, G Babbi, R Casadio, L Folkman, P Katsonis, K Kundu, ... Human mutation 40 (9), 1495-1506, 2019 | 19 | 2019 |
Multi-omics analysis of innate and adaptive responses to BCG vaccination reveals epigenetic cell states that predict trained immunity SJ Moorlag, L Folkman, R Ter Horst, T Krausgruber, D Barreca, ... Immunity 57 (1), 171-187. e14, 2024 | 17 | 2024 |
Assessment of predicted enzymatic activity of α‐N‐acetylglucosaminidase variants of unknown significance for CAGI 2016 WT Clark, L Kasak, C Bakolitsa, Z Hu, G Andreoletti, G Babbi, Y Bromberg, ... Human mutation 40 (9), 1519-1529, 2019 | 17 | 2019 |
Sequence-only evolutionary and predicted structural features for the prediction of stability changes in protein mutants L Folkman, B Stantic, A Sattar BMC bioinformatics 14, 1-9, 2013 | 17 | 2013 |
Towards sequence-based prediction of mutation-induced stability changes in unseen non-homologous proteins L Folkman, B Stantic, A Sattar BMC genomics 15, 1-12, 2014 | 14 | 2014 |
CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods S Jain, C Bakolitsa, SE Brenner, P Radivojac, J Moult, S Repo, ... Genome Biology 25 (1), 2024 | 5 | 2024 |
The use of a power analysis for influencing PIN verification on cryptographic smart card L Folkman Bakalásk práce, Masarykova univerzita, Fakulta informatiky, 2007 | 5 | 2007 |
Web-based bioinformatics predictors: Recommendations to assess lysosomal cholesterol trafficking diseases-related genes LL de Frutos, JJ Cebolla, P Irún, R Köhler, P Giraldo Methods of Information in Medicine 58 (01), 050-059, 2019 | 1 | 2019 |
Generic parallel genetic algorithm framework for protein optimisation L Folkman, W Pullan, B Stantic Algorithms and Architectures for Parallel Processing: 11th International …, 2011 | 1 | 2011 |
Insights into the multifaceted role of interleukin-37 on human immune cell regulation LU Teufel, V Matzaraki, L Folkman, R Ter Horst, SJ Moorlag, ... Clinical Immunology 268, 110368, 2024 | | 2024 |
Critical assessment of genome interpretation consortium. CAGI, the critical assessment of genome interpretation, establishes progress and pprospects for computational genetic … S Jain, C Bakolitsa, EB Steven, P Radivojac, J Moult, S Repo, AH Roger, ... Genome Biology 22 (22; 25 (1): 53.), 1-46, 2024 | | 2024 |
Predicting Stability and Functional Changes Induced by Protein Mutations with a Machine Learning Approach L Folkman | | 2014 |