Structure, function and diversity of the healthy human microbiome C Huttenhower, D Gevers, R Knight, S Abubucker, JH Badger, ... nature 486 (7402), 207, 2012 | 6592 | 2012 |
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons BJ Haas, D Gevers, AM Earl, M Feldgarden, DV Ward, G Giannoukos, ... Genome research 21 (3), 494-504, 2011 | 2393 | 2011 |
Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment XC Morgan, TL Tickle, H Sokol, D Gevers, KL Devaney, DV Ward, ... Genome biology 13 (9), 1-18, 2012 | 1899 | 2012 |
A framework for human microbiome research BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ... nature 486 (7402), 215, 2012 | 1617 | 2012 |
A catalog of reference genomes from the human microbiome Human Microbiome Jumpstart Reference Strains Consortium Science 328 (5981), 994-999, 2010 | 701 | 2010 |
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ... Nature biotechnology 29 (5), 415-420, 2011 | 495 | 2011 |
Tracking insertion mutants within libraries by deep sequencing and a genome-wide screen for Haemophilus genes required in the lung JD Gawronski, SMS Wong, G Giannoukos, DV Ward, BJ Akerley Proceedings of the National Academy of Sciences 106 (38), 16422-16427, 2009 | 314 | 2009 |
Early empiric antibiotic use in preterm infants is associated with lower bacterial diversity and higher relative abundance of Enterobacter C Greenwood, AL Morrow, AJ Lagomarcino, M Altaye, DH Taft, Z Yu, ... The Journal of pediatrics 165 (1), 23-29, 2014 | 256 | 2014 |
Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease E Papa, M Docktor, C Smillie, S Weber, SP Preheim, D Gevers, ... PloS one 7 (6), e39242, 2012 | 250 | 2012 |
Evaluation of 16S rDNA-based community profiling for human microbiome research Jumpstart Consortium Human Microbiome Project Data Generation Working Group PloS one 7 (6), e39315, 2012 | 247 | 2012 |
Strain-level microbial epidemiology and population genomics from shotgun metagenomics M Scholz, DV Ward, E Pasolli, T Tolio, M Zolfo, F Asnicar, DT Truong, ... Nature methods 13 (5), 435-438, 2016 | 243 | 2016 |
Early microbial and metabolomic signatures predict later onset of necrotizing enterocolitis in preterm infants AL Morrow, AJ Lagomarcino, KR Schibler, DH Taft, Z Yu, B Wang, ... Microbiome 1 (1), 1-16, 2013 | 233 | 2013 |
Recovery of ethanol-induced Akkermansia muciniphila depletion ameliorates alcoholic liver disease C Grander, TE Adolph, V Wieser, P Lowe, L Wrzosek, B Gyongyosi, ... Gut 67 (5), 891-901, 2018 | 215 | 2018 |
Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes G Giannoukos, DM Ciulla, K Huang, BJ Haas, J Izard, JZ Levin, J Livny, ... Genome biology 13 (3), 1-13, 2012 | 213 | 2012 |
Whole genome characterization of the mechanisms of daptomycin resistance in clinical and laboratory derived isolates of Staphylococcus aureus AY Peleg, S Miyakis, DV Ward, AM Earl, A Rubio, DR Cameron, S Pillai, ... PloS one 7 (1), e28316, 2012 | 188 | 2012 |
Peptide linkage mapping of the Agrobacterium tumefaciens vir-encoded type IV secretion system reveals protein subassemblies DV Ward, O Draper, JR Zupan, PC Zambryski Proceedings of the National Academy of Sciences 99 (17), 11493-11500, 2002 | 169 | 2002 |
The success of Acinetobacter species; genetic, metabolic and virulence attributes AY Peleg, A de Breij, MD Adams, GM Cerqueira, S Mocali, M Galardini, ... PloS one 7 (10), e46984, 2012 | 163 | 2012 |
Bifidobacteria exhibit social behavior through carbohydrate resource sharing in the gut C Milani, GA Lugli, S Duranti, F Turroni, L Mancabelli, C Ferrario, ... Scientific reports 5 (1), 1-14, 2015 | 159 | 2015 |
Metagenomic Sequencing with Strain-Level Resolution Implicates Uropathogenic E. coli in Necrotizing Enterocolitis and Mortality in Preterm Infants DV Ward, M Scholz, M Zolfo, DH Taft, KR Schibler, A Tett, N Segata, ... Cell reports 14 (12), 2912-2924, 2016 | 120 | 2016 |
Assembly of the VirB transport complex for DNA transfer from Agrobacterium tumefaciens to plant cells JR Zupan, D Ward, P Zambryski Current opinion in microbiology 1 (6), 649-655, 1998 | 94 | 1998 |