| Machine learning in enzyme engineering S Mazurenko, Z Prokop, J Damborsky ACS Catalysis 10 (2), 1210-1223, 2019 | 218 | 2019 |
| Computer‐assisted engineering of hyperstable fibroblast growth factor 2 P Dvorak, D Bednar, P Vanacek, L Balek, L Eiselleova, V Stepankova, ... Biotechnology and bioengineering 115 (4), 850-862, 2018 | 49 | 2018 |
| FireProtDB: database of manually curated protein stability data J Stourac, J Dubrava, M Musil, J Horackova, J Damborsky, S Mazurenko, ... Nucleic acids research 49 (D1), D319-D324, 2021 | 48 | 2021 |
| Exploration of protein unfolding by modelling calorimetry data from reheating S Mazurenko, A Kunka, K Beerens, CM Johnson, J Damborsky, Z Prokop Scientific Reports 7 (1), 16321, 2017 | 45 | 2017 |
| CalFitter: a web server for analysis of protein thermal denaturation data S Mazurenko, J Stourac, A Kunka, S Nedeljković, D Bednar, Z Prokop, ... Nucleic acids research 46 (W1), W344-W349, 2018 | 38 | 2018 |
| Substrate inhibition by the blockage of product release and its control by tunnel engineering P Kokkonen, A Beier, S Mazurenko, J Damborsky, D Bednar, Z Prokop RSC Chemical Biology 2 (2), 645-655, 2021 | 33 | 2021 |
| A differential equation for the gauge function of the star-shaped attainability set of a differential inclusion SS Mazurenko Doklady Mathematics 86, 476-479, 2012 | 25 | 2012 |
| Predicting protein stability and solubility changes upon mutations: data perspective S Mazurenko ChemCatChem 12 (22), 5590-5598, 2020 | 24 | 2020 |
| Evolutionary analysis as a powerful complement to energy calculations for protein stabilization K Beerens, S Mazurenko, A Kunka, SM Marques, N Hansen, M Musil, ... ACS Catalysis 8 (10), 9420-9428, 2018 | 22 | 2018 |
| Acceleration and global convergence of a first-order primal-dual method for nonconvex problems C Clason, S Mazurenko, T Valkonen SIAM Journal on Optimization 29 (1), 933-963, 2019 | 15 | 2019 |
| Tools for computational design and high-throughput screening of therapeutic enzymes M Vasina, J Velecký, J Planas-Iglesias, SM Marques, J Skarupova, ... Advanced Drug Delivery Reviews, 114143, 2022 | 13 | 2022 |
| Partial differential equation for evolution of star-shaped reachability domains of differential inclusions S Mazurenko Set-Valued and Variational Analysis 24, 333-354, 2016 | 11 | 2016 |
| Primal–dual proximal splitting and generalized conjugation in non-smooth non-convex optimization C Clason, S Mazurenko, T Valkonen Applied Mathematics & Optimization 84 (2), 1239-1284, 2021 | 9 | 2021 |
| Development of fluorescent assay for monitoring of dehalogenase activity S Nevolova, E Manaskova, S Mazurenko, J Damborsky, Z Prokop Biotechnology Journal 14 (3), 1800144, 2019 | 9 | 2019 |
| Machine learning in enzyme engineering. ACS Catal 10: 1210–1223 S Mazurenko, Z Prokop, J Damborsky | 8 | 2020 |
| The dynamic programming method in systems with states in the form of distributions SS Mazurenko Moscow University Computational Mathematics and Cybernetics 35, 133-141, 2011 | 8 | 2011 |
| Primal-dual block-proximal splitting for a class of non-convex problems S Mazurenko, J Jauhiainen, T Valkonen arXiv preprint arXiv:1911.06284, 2019 | 6 | 2019 |
| Advanced database mining of efficient haloalkane dehalogenases by sequence and structure bioinformatics and microfluidics M Vasina, P Vanacek, J Hon, D Kovar, H Faldynova, A Kunka, T Buryska, ... Chem Catalysis 2 (10), 2704-2725, 2022 | 5 | 2022 |
| SoluProtMutDB: A manually curated database of protein solubility changes upon mutations J Velecký, M Hamsikova, J Stourac, M Musil, J Damborsky, D Bednar, ... Computational and Structural Biotechnology Journal 20, 6339-6347, 2022 | 2 | 2022 |
| Sensitive operation of enzyme-based biodevices by advanced signal processing S Mazurenko, S Bidmanova, M Kotlanova, J Damborsky, Z Prokop PloS one 13 (6), e0198913, 2018 | 2 | 2018 |
